ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

E7FBA3_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/E7FBA3_F1_nD4

E7FBA3_F1_nD4

UID: 003879364

AlphaFold

Range: 526-569,681-713,761-780,807-910
AlphaFold: AF-E7FBA3
UniProt: E7FBA3 (all domains)
Gene: smg8

Protein: Nonsense-mediated mRNA decay factor SMG8

3D Structure

Loading viewer...

Related Domains

Browse other domains in Smg8_Smg9 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupGlycosyl hydrolase domain(12.1)

TT-groupGlycosyl hydrolase domain(12.1.1)

FFamilySmg8_Smg9(12.1.1.91)

Pfam Families

PF10220Smg8_Smg9

Smg8_Smg9

External Links

AlphaFold DB: E7FBA3 UniProt: E7FBA3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 526-569,681-713,761-780,807-910