ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q58ER0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q58ER0_F1_nD3

Q58ER0_F1_nD3

UID: 003880424

AlphaFold

Range: 421-535
AlphaFold: AF-Q58ER0
UniProt: Q58ER0 (all domains)
Gene: rbm39b

Protein: RNA-binding motif protein 39b (RNA-binding protein 39b)

3D Structure

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Related Domains

Browse other domains in RBM39linker →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRBM39linker(304.9.1.24)

Pfam Families

PF15519RBM39linker

linker between RRM2 and RRM3 domains in RBM39 protein

External Links

AlphaFold DB: Q58ER0 UniProt: Q58ER0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 421-535