ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q08BR4_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q08BR4_F1_nD5

Q08BR4_F1_nD5

UID: 003880531

AlphaFold

Range: 596-670
AlphaFold: AF-Q08BR4
UniProt: Q08BR4 (all domains)
Gene: setdb1b

Protein: Histone-lysine N-methyltransferase SETDB1-B (EC 2.1.1.366) (SET domain bifurcated 1B)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA-binding domain(252)

HH-groupMethyl-CpG-binding domain, MBD(252.1)

TT-groupMethyl-CpG-binding domain, MBD(252.1.1)

FFamilyMBD(252.1.1.1)

Pfam Families

Methyl-CpG binding domain

ClanCL0081MBD-like

External Links

AlphaFold DB: Q08BR4 UniProt: Q08BR4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 596-670