ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F1Q4U5_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/F1Q4U5_F1_nD6

F1Q4U5_F1_nD6

UID: 003880649

AlphaFold

Range: 911-1045
AlphaFold: AF-F1Q4U5
UniProt: F1Q4U5 (all domains)
Gene: xrn1

Protein: 5'-3' exoribonuclease 1 (EC 3.1.13.-)

3D Structure

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Related Domains

Browse other domains in XRN1_D2_D3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyXRN1_D2_D3(101.1.2.167)

Pfam Families

PF18334XRN1_D2_D3

Exoribonuclease Xrn1 D2/D3 domain

ClanCL0010SH3

External Links

AlphaFold DB: F1Q4U5 UniProt: F1Q4U5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 911-1045