ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F1Q4U5_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/F1Q4U5_F1_nD5

F1Q4U5_F1_nD5

UID: 003880651

AlphaFold

Range: 651-910,1046-1175
AlphaFold: AF-F1Q4U5
UniProt: F1Q4U5 (all domains)
Gene: xrn1

Protein: 5'-3' exoribonuclease 1 (EC 3.1.13.-)

3D Structure

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Related Domains

Browse other domains in SH3_12, XRN1_D1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySH3_12, XRN1_D1(4.1.1.315)

Pfam Families

Xrn1 SH3-like domain

ClanCL0010SH3

PF18332XRN1_D1

Exoribonuclease Xrn1 D1 domain

ClanCL0010SH3

External Links

AlphaFold DB: F1Q4U5 UniProt: F1Q4U5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 651-910,1046-1175