ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q501W9_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q501W9_F1_nD4

Q501W9_F1_nD4

UID: 003881281

AlphaFold

Range: 321-395
AlphaFold: AF-Q501W9
UniProt: Q501W9 (all domains)
Gene: polr1e

Protein: DNA-directed RNA polymerase I subunit RPA49 (Polr1e protein) (Polymerase (RNA) I polypeptide E) (RNA polymerase I subunit E)

3D Structure

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Related Domains

Browse other domains in RNA_pol_I_A49 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRNA_pol_I_A49(101.1.2.79)

Pfam Families

PF06870RNA_pol_I_A49

A49-like RNA polymerase I associated factor

ClanCL0662Triple_barrel

External Links

AlphaFold DB: Q501W9 UniProt: Q501W9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 321-395