ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F1QJL4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/F1QJL4_F1_nD1

F1QJL4_F1_nD1

UID: 003881929

AlphaFold

Range: 86-195
AlphaFold: AF-F1QJL4
UniProt: F1QJL4 (all domains)
Gene: lig3

Protein: DNA ligase (EC 6.5.1.1)

3D Structure

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Related Domains

Browse other domains in zf-PARP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupPARP-type zinc finger(377.1.2)

FFamilyzf-PARP(377.1.2.1)

Pfam Families

PF00645zf-PARP

Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region

ClanCL0839Tbcl_zf

External Links

AlphaFold DB: F1QJL4 UniProt: F1QJL4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-195