ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A2R8RNF4_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A2R8RNF4_F1_nD3

A0A2R8RNF4_F1_nD3

UID: 003883476

AlphaFold

Range: 176-255
AlphaFold: AF-A0A2R8RNF4
UniProt: A0A2R8RNF4 (all domains)

Protein: deleted

3D Structure

Loading viewer...

Related Domains

Browse other domains in PEG10-RTL1_C-capsid →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyPEG10-RTL1_C-capsid(170.1.1.22)

Pfam Families

PF30901PEG10-RTL1_C-capsid

PEG10/RTL1, C-terminal capsid-like domain

ClanCL0523GAG-polyprotein

External Links

AlphaFold DB: A0A2R8RNF4 UniProt: A0A2R8RNF4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-255