ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A1L2E4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A1L2E4_F1_nD2

A1L2E4_F1_nD2

UID: 003884780

AlphaFold

Range: 211-315,366-440
AlphaFold: AF-A1L2E4
UniProt: A1L2E4 (all domains)
Gene: rnmtl1b

Protein: rRNA methyltransferase 3B, mitochondrial (EC 2.1.1.-) (RNA methyltransferase-like protein 1B) (rRNA (guanosine-2'-O)-methyltransferase)

3D Structure

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Related Domains

Browse other domains in SpoU_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySpoU_methylase(2488.1.1.1)

Pfam Families

PF00588SpoU_methylase

SpoU rRNA Methylase family

ClanCL0098SPOUT

External Links

AlphaFold DB: A1L2E4 UniProt: A1L2E4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 211-315,366-440