ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5PQZ5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5PQZ5_F1_nD1

Q5PQZ5_F1_nD1

UID: 003885607

AlphaFold

Range: 61-135
AlphaFold: AF-Q5PQZ5
UniProt: Q5PQZ5 (all domains)
Gene: sox17

Protein: SRY-box containing gene 17 (SRY-box transcription factor 17) (Transcription factor SOX-17)

3D Structure

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Related Domains

Browse other domains in HMG_box →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHMG-box-like(190)

HH-groupHMG-box(190.1)

TT-groupHMG-box(190.1.1)

FFamilyHMG_box(190.1.1.1)

Pfam Families

PF00505HMG_box

HMG (high mobility group) box

ClanCL0114HMG-box

External Links

AlphaFold DB: Q5PQZ5 UniProt: Q5PQZ5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 61-135