ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

F1R7R1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/F1R7R1_F1_nD3

F1R7R1_F1_nD3

UID: 003890777

AlphaFold

Range: 931-1099
AlphaFold: AF-F1R7R1
UniProt: F1R7R1 (all domains)
Gene: smg5

Protein: Nonsense-mediated mRNA decay factor SMG5 (EST1-like protein B) (SMG-5 homolog)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PIN_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyPIN_4(2006.1.4.10)

Pfam Families

PIN domain

ClanCL0280PIN

External Links

AlphaFold DB: F1R7R1 UniProt: F1R7R1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 931-1099