ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

F1Q9E8_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F1Q9E8_F1_nD4

F1Q9E8_F1_nD4

UID: 003891014

AlphaFold

Range: 656-785
AlphaFold: AF-F1Q9E8
UniProt: F1Q9E8 (all domains)
Gene: lig4

Protein: DNA ligase (EC 6.5.1.1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_ligase_IV, BRCT_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupBRCT domain(7568)

HH-groupBRCT domain(7568.1)

TT-groupBRCT domain(7568.1.1)

FFamilyDNA_ligase_IV, BRCT_2(7568.1.1.21)

Pfam Families

PF11411DNA_ligase_IV

DNA ligase IV

BRCT domain

ClanCL0459BRCT-like

External Links

AlphaFold DB: F1Q9E8 UniProt: F1Q9E8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 656-785