ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F1QU86_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F1QU86_F1_nD2

F1QU86_F1_nD2

UID: 003891928

AlphaFold

Range: 521-580
AlphaFold: AF-F1QU86
UniProt: F1QU86 (all domains)
Gene: sema4bb

Protein: Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Bb

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrefoil/Plexin domain-like(355)

HH-groupTrefoil/Plexin domain-like(355.1)

TT-groupTrefoil/Plexin domain-like(355.1.1)

FFamilyPSI(355.1.1.2)

Pfam Families

Plexin repeat

ClanCL0630PSI

External Links

AlphaFold DB: F1QU86 UniProt: F1QU86

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 521-580