ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q588C6_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q588C6_F1_nD4

Q588C6_F1_nD4

UID: 003892060

AlphaFold

Range: 511-815
AlphaFold: AF-Q588C6
UniProt: Q588C6 (all domains)
Gene: dnmt3bb.1

Protein: DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyDNA_methylase(2003.1.5.1)

Pfam Families

PF00145DNA_methylase

C-5 cytosine-specific DNA methylase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q588C6 UniProt: Q588C6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 511-815