ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5RJ80_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5RJ80_F1_nD3

Q5RJ80_F1_nD3

UID: 003892288

AlphaFold

Range: 786-914
AlphaFold: AF-Q5RJ80
UniProt: Q5RJ80 (all domains)
Gene: caprin2

Protein: Caprin-2 (RNA granule protein 140)

3D Structure

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Related Domains

Browse other domains in C1q →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupTNF-like(10.3)

TT-groupTNF-like(10.3.1)

FFamilyC1q(10.3.1.2)

Pfam Families

C1q domain

ClanCL0100C1q_TNF

External Links

AlphaFold DB: Q5RJ80 UniProt: Q5RJ80

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 786-914