ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4FTT4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A4FTT4_F1_nD1

A4FTT4_F1_nD1

UID: 003892396

AlphaFold

Range: 11-160
AlphaFold: AF-A4FTT4
UniProt: A4FTT4 (all domains)
Gene: rbpjb

Protein: Recombination signal-binding protein for immunoglobulin kappa J region b (Su(H)B)

3D Structure

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Related Domains

Browse other domains in LAG1-DNAbind →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilyLAG1-DNAbind(11.1.5.34)

Pfam Families

PF09271LAG1-DNAbind

LAG1, DNA binding

ClanCL0073P53-like

External Links

AlphaFold DB: A4FTT4 UniProt: A4FTT4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-160