ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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A0A1D5NSI4_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A1D5NSI4_F1_nD5

A0A1D5NSI4_F1_nD5

UID: 003892464

AlphaFold

Range: 1871-1985
AlphaFold: AF-A0A1D5NSI4
UniProt: A0A1D5NSI4 (all domains)

Protein: deleted

3D Structure

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Related Domains

Browse other domains in Ubiquitin_6 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_6(221.1.1.116)

Pfam Families

PF23092Ubiquitin_6

Neuron navigator 1-like, ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: A0A1D5NSI4 UniProt: A0A1D5NSI4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1871-1985