ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

F1R9L1_F1_nD7 - ECOD Domain | ECOD

ECOD/Domains/F1R9L1_F1_nD7

F1R9L1_F1_nD7

UID: 003893239

AlphaFold

Range: 791-840
AlphaFold: AF-F1R9L1
UniProt: F1R9L1 (all domains)
Gene: sema5a

Protein: Sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A (Semaphorin-5A isoform X1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TSP_1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTSP-1 type 1 repeat(922)

HH-groupTSP-1 type 1 repeat(922.1)

TT-groupTSP-1 type 1 repeat(922.1.1)

FFamilyTSP_1(922.1.1.1)

Pfam Families

Thrombospondin type 1 domain

ClanCL0692TSP1

External Links

AlphaFold DB: F1R9L1 UniProt: F1R9L1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 791-840