ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

X1WDD8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/X1WDD8_F1_nD1

X1WDD8_F1_nD1

UID: 003896361

AlphaFold

Range: 6-255,286-485,506-730,751-810
AlphaFold: AF-X1WDD8
UniProt: X1WDD8 (all domains)
Gene: ap5z1

Protein: AP-5 complex subunit zeta-1 (Adaptor-related protein complex 5 subunit zeta 1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SPG48, TPR_AP5Z1, TPR_AP5Z1_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySPG48, TPR_AP5Z1, TPR_AP5Z1_C(109.4.1.2341)

Pfam Families

AP-5 complex subunit, vesicle trafficking

ClanCL0020TPR

PF25153TPR_AP5Z1

AP-5 complex subunit zeta-1, TPR repeats

ClanCL0020TPR

PF25154TPR_AP5Z1_C

AP-5 complex subunit zeta-1, C-terminal TPR repeats

ClanCL0020TPR

External Links

AlphaFold DB: X1WDD8 UniProt: X1WDD8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-255,286-485,506-730,751-810