ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A2R8QV54_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A2R8QV54_F1_nD2

A0A2R8QV54_F1_nD2

UID: 003897993

AlphaFold

Range: 141-230
AlphaFold: AF-A0A2R8QV54
UniProt: A0A2R8QV54 (all domains)

Protein: deleted

3D Structure

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Related Domains

Browse other domains in PEG10-RTL1_C-capsid →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyPEG10-RTL1_C-capsid(170.1.1.22)

Pfam Families

PF30901PEG10-RTL1_C-capsid

PEG10/RTL1, C-terminal capsid-like domain

ClanCL0523GAG-polyprotein

External Links

AlphaFold DB: A0A2R8QV54 UniProt: A0A2R8QV54

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 141-230