ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A2R8QV54_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A2R8QV54_F1_nD1

A0A2R8QV54_F1_nD1

UID: 003897997

AlphaFold

Range: 57-135
AlphaFold: AF-A0A2R8QV54
UniProt: A0A2R8QV54 (all domains)

Protein: deleted

3D Structure

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Related Domains

Browse other domains in DUF4939 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyDUF4939(170.2.1.7)

Pfam Families

PF16297RTL1-8_LDOC

RTL1/3-8/LDOC, capsid-like domain

ClanCL0523GAG-polyprotein

External Links

AlphaFold DB: A0A2R8QV54 UniProt: A0A2R8QV54

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 57-135