ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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B8A4N0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/B8A4N0_F1_nD1

B8A4N0_F1_nD1

UID: 003900460

AlphaFold

Range: 46-155
AlphaFold: AF-B8A4N0
UniProt: B8A4N0 (all domains)
Gene: oip5

Protein: Opa-interacting protein 5 (Protein Mis18-beta)

3D Structure

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Related Domains

Browse other domains in Yippee-Mis18 →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupETN0001 domain-like(708)

HH-groupETN0001 domain-like(708.1)

TT-groupMss4-like(708.1.2)

FFamilyYippee-Mis18(708.1.2.3)

Pfam Families

PF03226Yippee-Mis18

Yippee zinc-binding/DNA-binding /Mis18, centromere assembly

ClanCL0080Beta-tent

External Links

AlphaFold DB: B8A4N0 UniProt: B8A4N0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-155