ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F1R2N8_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F1R2N8_F1_nD4

F1R2N8_F1_nD4

UID: 003901117

AlphaFold

Range: 6-35,86-135,541-610,1166-1195
AlphaFold: AF-F1R2N8
UniProt: F1R2N8 (all domains)
Gene: arid4b

Protein: AT-rich interactive domain-containing protein 4B (180 kDa Sin3-associated polypeptide) (Histone deacetylase complex subunit SAP180)

3D Structure

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Related Domains

Browse other domains in Tudor-knot →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupChromo domain-like(4.8)

TT-groupChromo domain-like(4.8.1)

FFamilyTudor-knot(4.8.1.6)

Pfam Families

PF11717Tudor-knot

RNA binding activity-knot of a chromodomain

ClanCL0010SH3

External Links

AlphaFold DB: F1R2N8 UniProt: F1R2N8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-35,86-135,541-610,1166-1195