ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B8A5M1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/B8A5M1_F1_nD3

B8A5M1_F1_nD3

UID: 003903183

AlphaFold

Range: 381-669
AlphaFold: AF-B8A5M1
UniProt: B8A5M1 (all domains)
Gene: trim2b

Protein: Tripartite motif-containing protein 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRIM2) (RING-type E3 ubiquitin transferase TRIM2)

3D Structure

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Related Domains

Browse other domains in NHL, DUF5128 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyNHL, DUF5128(5.1.3.140)

Pfam Families

NHL repeat

ClanCL0186Beta_propeller

PF17170DUF5128

6-bladed beta-propeller

ClanCL0186Beta_propeller

External Links

AlphaFold DB: B8A5M1 UniProt: B8A5M1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 381-669