ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q567J5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q567J5_F1_nD1

Q567J5_F1_nD1

UID: 003907144

AlphaFold

Range: 36-170
AlphaFold: AF-Q567J5
UniProt: Q567J5 (all domains)
Gene: snrnp25

Protein: Small nuclear ribonucleoprotein 25 (Zgc:112000)

3D Structure

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Related Domains

Browse other domains in Ubiquitin_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_4(221.1.1.59)

Pfam Families

PF18036Ubiquitin_4

Ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q567J5 UniProt: Q567J5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-170