ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q1LYM8_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q1LYM8_F1_nD5

Q1LYM8_F1_nD5

UID: 003908918

AlphaFold

Range: 496-610
AlphaFold: AF-Q1LYM8
UniProt: Q1LYM8 (all domains)
Gene: sin3b

Protein: Paired amphipathic helix protein Sin3b (Histone deacetylase complex subunit Sin3b) (Transcriptional corepressor Sin3b)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sin3_corepress →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupFlagellar export chaperone FliS(601.13)

TT-groupFlagellar export chaperone FliS(601.13.1)

FFamilySin3_corepress(601.13.1.3)

Pfam Families

PF08295Sin3_corepress

Sin3 family co-repressor

External Links

AlphaFold DB: Q1LYM8 UniProt: Q1LYM8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 496-610