ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q6NX86_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q6NX86_F1_nD1

Q6NX86_F1_nD1

UID: 003909649

AlphaFold

Range: 1-85
AlphaFold: AF-Q6NX86
UniProt: Q6NX86 (all domains)
Gene: hmgb1a

Protein: High mobility group box 1a (High mobility group protein B1a) (High-mobility group box 1)

3D Structure

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Related Domains

Browse other domains in HMG_box_2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHMG-box-like(190)

HH-groupHMG-box(190.1)

TT-groupHMG-box(190.1.1)

FFamilyHMG_box_2(190.1.1.3)

Pfam Families

PF09011HMG_box_2

HMG-box domain

ClanCL0114HMG-box

External Links

AlphaFold DB: Q6NX86 UniProt: Q6NX86

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-85