ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5XJA0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5XJA0_F1_nD1

Q5XJA0_F1_nD1

UID: 003911827

AlphaFold

Range: 6-55
AlphaFold: AF-Q5XJA0
UniProt: Q5XJA0 (all domains)
Gene: tdp2

Protein: Tyrosyl-DNA phosphodiesterase 2 (Tyr-DNA phosphodiesterase 2) (EC 3.1.4.-) (5'-tyrosyl-DNA phosphodiesterase) (5'-Tyr-DNA phosphodiesterase) (TRAF and TNF receptor-associated protein homolog)

3D Structure

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Related Domains

Browse other domains in UBA_4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyUBA_4(103.1.1.14)

Pfam Families

UBA-like domain

ClanCL0214UBA

External Links

AlphaFold DB: Q5XJA0 UniProt: Q5XJA0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-55