ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0MTA1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0MTA1_F1_nD1

A0MTA1_F1_nD1

UID: 003911885

AlphaFold

Range: 41-310
AlphaFold: AF-A0MTA1
UniProt: A0MTA1 (all domains)
Gene: apex1

Protein: DNA repair nuclease APEX1 (EC 3.1.11.2) (EC 3.1.21.-) (APEX nuclease) (APEN) (Apurinic-apyrimidinic endonuclease 1) (AP endonuclease 1) (zAP1)

3D Structure

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Related Domains

Browse other domains in Exo_endo_phos →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCarbon-nitrogen hydrolase-like(246)

HH-groupDNase I-like(246.3)

TT-groupDNase I-like(246.3.1)

FFamilyExo_endo_phos(246.3.1.1)

Pfam Families

PF03372Exo_endo_phos

Endonuclease/Exonuclease/phosphatase family

ClanCL0530DNase_I-like

External Links

AlphaFold DB: A0MTA1 UniProt: A0MTA1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-310