ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F1RAG3_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F1RAG3_F1_nD4

F1RAG3_F1_nD4

UID: 003912054

AlphaFold

Range: 606-645
AlphaFold: AF-F1RAG3
UniProt: F1RAG3 (all domains)
Gene: nid1a

Protein: Nidogen 1a

3D Structure

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Related Domains

Browse other domains in cEGF, EGF_3 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupEGF/Laminin(389.1.1)

FFamilycEGF, EGF_3(389.1.1.100)

Pfam Families

Complement Clr-like EGF-like

ClanCL0001EGF

EGF domain

ClanCL0001EGF

External Links

AlphaFold DB: F1RAG3 UniProt: F1RAG3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 606-645