ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2x5uL1 - ECOD Domain | ECOD

ECOD/Domains/e2x5uL1

e2x5uL1

UID: 000391207

PDB

Range: L:1-273
PDB: 2X5U chain L(all domains)
UniProt: P06009 (all domains)
Gene: pufL

Molecule: REACTION CENTER PROTEIN L CHAIN

3D Structure

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Related Domains

Browse other domains in Photo_RC →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBacterial photosystem II reaction centre L and M subunits-like(5037)

HH-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1)

TT-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1.1)

FFamilyPhoto_RC(5037.1.1.1)

Ligands

in contact, ≤ 4 Å

Menaquinone 7MQ7
drugDrugBank DB13075
Bacteriochlorophyll bBCB
Bacteriopheophytin bBPB

Pfam Families

PF00124Photo_RC

Photosynthetic reaction centre protein

External Links

ECOD PDB View: 2X5U RCSB PDB: 2X5U PDBe: 2X5U UniProt: P06009

Downloads

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FE (II) IONFE2

metal

Shown in the structure viewer. Drug annotations from DrugDomain.