ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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X1WGI4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/X1WGI4_F1_nD1

X1WGI4_F1_nD1

UID: 003912393

AlphaFold

Range: 596-733
AlphaFold: AF-X1WGI4
UniProt: X1WGI4 (all domains)
Gene: col8a1b

Protein: Collagen alpha-1(VIII) chain (Collagen, type VIII, alpha 1b)

3D Structure

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Related Domains

Browse other domains in C1q →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupTNF-like(10.3)

TT-groupTNF-like(10.3.1)

FFamilyC1q(10.3.1.2)

Pfam Families

C1q domain

ClanCL0100C1q_TNF

External Links

AlphaFold DB: X1WGI4 UniProt: X1WGI4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 596-733