ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5XJK9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5XJK9_F1_nD1

Q5XJK9_F1_nD1

UID: 003913040

AlphaFold

Range: 91-290
AlphaFold: AF-Q5XJK9
UniProt: Q5XJK9 (all domains)
Gene: cmss1

Protein: Protein CMSS1 (Cms1 ribosomal small subunit homolog)

3D Structure

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Related Domains

Browse other domains in CMS1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyCMS1(2004.1.1.310)

Pfam Families

U3-containing 90S pre-ribosomal complex subunit

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q5XJK9 UniProt: Q5XJK9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 91-290