ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

F1Q7D2_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/F1Q7D2_F1_nD6

F1Q7D2_F1_nD6

UID: 003913475

AlphaFold

Range: 876-965
AlphaFold: AF-F1Q7D2
UniProt: F1Q7D2 (all domains)
Gene: usp40

Protein: Ubiquitin carboxyl-terminal hydrolase 40 (Ubiquitin-specific peptidase 40)

3D Structure

Loading viewer...

Related Domains

Browse other domains in UBL_USP40 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUBL_USP40(221.1.1.187)

Pfam Families

PF25822UBL_USP40

USP40 ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: F1Q7D2 UniProt: F1Q7D2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 876-965