ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F1RBA1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/F1RBA1_F1_nD3

F1RBA1_F1_nD3

UID: 003916514

AlphaFold

Range: 436-550,581-630,676-760,781-845,871-970
AlphaFold: AF-F1RBA1
UniProt: F1RBA1 (all domains)
Gene: usp38

Protein: Ubiquitin-specific peptidase 38

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyUCH(219.1.1.3)

Pfam Families

Ubiquitin carboxyl-terminal hydrolase

ClanCL0125Peptidase_CA

External Links

AlphaFold DB: F1RBA1 UniProt: F1RBA1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 436-550,581-630,676-760,781-845,871-970