ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5SPB2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5SPB2_F1_nD2

Q5SPB2_F1_nD2

UID: 003916889

AlphaFold

Range: 1241-1315
AlphaFold: AF-Q5SPB2
UniProt: Q5SPB2 (all domains)
Gene: scaf11

Protein: Protein SCAF11 isoform X1 (SR-related CTD-associated factor 11)

3D Structure

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Related Domains

Browse other domains in SCAF11-like_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSigma2 domain-like(142)

HH-groupSigma2 domain of RNA polymerase sigma factors(142.1)

TT-groupSigma2 domain of RNA polymerase sigma factors(142.1.1)

FFamilySCAF11-like_C(142.1.1.22)

Pfam Families

PF23030SCAF11-like_C

SCAF11-like, C-terminal domain

ClanCL0916SRI

External Links

AlphaFold DB: Q5SPB2 UniProt: Q5SPB2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1241-1315