ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q1LYS1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q1LYS1_F1_nD2

Q1LYS1_F1_nD2

UID: 003917281

AlphaFold

Range: 516-580
AlphaFold: AF-Q1LYS1
UniProt: Q1LYS1 (all domains)
Gene: sema3e

Protein: Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E (Semaphorin-3E precursor)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrefoil/Plexin domain-like(355)

HH-groupTrefoil/Plexin domain-like(355.1)

TT-groupTrefoil/Plexin domain-like(355.1.1)

FFamilyPSI(355.1.1.2)

Pfam Families

Plexin repeat

ClanCL0630PSI

External Links

AlphaFold DB: Q1LYS1 UniProt: Q1LYS1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 516-580