ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A2R8Q5T8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A2R8Q5T8_F1_nD2

A0A2R8Q5T8_F1_nD2

UID: 003917326

AlphaFold

Range: 546-605
AlphaFold: AF-A0A2R8Q5T8
UniProt: A0A2R8Q5T8 (all domains)
Gene: sema3fb

Protein: Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrefoil/Plexin domain-like(355)

HH-groupTrefoil/Plexin domain-like(355.1)

TT-groupTrefoil/Plexin domain-like(355.1.1)

FFamilyPSI(355.1.1.2)

Pfam Families

Plexin repeat

ClanCL0630PSI

External Links

AlphaFold DB: A0A2R8Q5T8 UniProt: A0A2R8Q5T8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 546-605