ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F1Q5G8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F1Q5G8_F1_nD2

F1Q5G8_F1_nD2

UID: 003918583

AlphaFold

Range: 521-570
AlphaFold: AF-F1Q5G8
UniProt: F1Q5G8 (all domains)
Gene: si:dkey-49n23.1

Protein: Semaphorin-3D (Si:dkey-49n23.1)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrefoil/Plexin domain-like(355)

HH-groupTrefoil/Plexin domain-like(355.1)

TT-groupTrefoil/Plexin domain-like(355.1.1)

FFamilyPSI(355.1.1.2)

Pfam Families

Plexin repeat

ClanCL0630PSI

External Links

AlphaFold DB: F1Q5G8 UniProt: F1Q5G8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 521-570