ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q588C1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q588C1_F1_nD1

Q588C1_F1_nD1

UID: 003918690

AlphaFold

Range: 6-200,226-380
AlphaFold: AF-Q588C1
UniProt: Q588C1 (all domains)
Gene: trdmt1

Protein: tRNA (cytosine(38)-C(5))-methyltransferase (EC 2.1.1.204) (DNA (cytosine-5)-methyltransferase-like protein 2)

3D Structure

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Related Domains

Browse other domains in DNA_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyDNA_methylase(2003.1.5.1)

Pfam Families

PF00145DNA_methylase

C-5 cytosine-specific DNA methylase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q588C1 UniProt: Q588C1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-200,226-380