ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q803H1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q803H1_F1_nD2

Q803H1_F1_nD2

UID: 003918775

AlphaFold

Range: 236-360
AlphaFold: AF-Q803H1
UniProt: Q803H1 (all domains)
Gene: rbm39a

Protein: RNA-binding motif protein 39a (RNA-binding protein 39a) (Rbm39a protein)

3D Structure

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Related Domains

Browse other domains in RRM_1, RBM39linker →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1, RBM39linker(304.9.1.83)

Pfam Families

RNA recognition motif

ClanCL0221RRM

PF15519RBM39linker

linker between RRM2 and RRM3 domains in RBM39 protein

External Links

AlphaFold DB: Q803H1 UniProt: Q803H1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-360