ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3l0oB2 - ECOD Domain | ECOD

ECOD/Domains/e3l0oB2

e3l0oB2

UID: 000391907

PDB

Range: B:58-130
PDB: 3L0O chain B(all domains)
UniProt: P38527 (all domains)
Gene: rho

Molecule: Transcription termination factor rho

3D Structure

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Related Domains

Browse other domains in Rho_RNA_bind →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRho_RNA_bind(2.1.1.35)

Ligands

in contact, ≤ 4 Å

URANYL (VI) IONIUM

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07497Rho_RNA_bind

Rho termination factor, RNA-binding domain

ClanCL0021OB

External Links

ECOD PDB View: 3L0O RCSB PDB: 3L0O PDBe: 3L0O UniProt: P38527

Downloads

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