ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F1Q8J8_F1_nD13 - ECOD Domain | ECOD

ECOD/Domains/F1Q8J8_F1_nD13

F1Q8J8_F1_nD13

UID: 003919910

AlphaFold

Range: 546-600
AlphaFold: AF-F1Q8J8
UniProt: F1Q8J8 (all domains)
Gene: prdm5

Protein: PR domain zinc finger protein 5 (PR domain-containing protein 5)

3D Structure

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Related Domains

Browse other domains in zf-C2H2, zf-H2C2_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-C2H2, zf-H2C2_2(386.1.1.233)

Pfam Families

PF00096zf-C2H2

Zinc finger, C2H2 type

ClanCL0361C2H2-zf

PF13465zf-H2C2_2

Zinc-finger double domain

ClanCL0361C2H2-zf

External Links

AlphaFold DB: F1Q8J8 UniProt: F1Q8J8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 546-600