ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0K0EMZ1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0K0EMZ1_F1_nD1

A0A0K0EMZ1_F1_nD1

UID: 003924265

AlphaFold

Range: 16-165
AlphaFold: AF-A0A0K0EMZ1
UniProt: A0A0K0EMZ1 (all domains)

Protein: Transcription initiation factor IIF subunit alpha

3D Structure

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Related Domains

Browse other domains in TFIIF_alpha →

Classification

AArchitecturebeta complex topology(a.5)

XX-grouptriple barrel(59)

HH-grouptriple barrel(59.1)

TT-groupRap30/74 interaction domains-like(59.1.1)

FFamilyTFIIF_alpha(59.1.1.3)

Pfam Families

PF05793TFIIF_alpha

Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)

ClanCL0123HTH

External Links

AlphaFold DB: A0A0K0EMZ1 UniProt: A0A0K0EMZ1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-165