ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0K0EMZ1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0K0EMZ1_F1_nD2

A0A0K0EMZ1_F1_nD2

UID: 003924273

AlphaFold

Range: 411-483
AlphaFold: AF-A0A0K0EMZ1
UniProt: A0A0K0EMZ1 (all domains)

Protein: Transcription initiation factor IIF subunit alpha

3D Structure

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Related Domains

Browse other domains in TFIIF_alpha →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyTFIIF_alpha(101.1.2.75)

Pfam Families

PF05793TFIIF_alpha

Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)

ClanCL0123HTH

External Links

AlphaFold DB: A0A0K0EMZ1 UniProt: A0A0K0EMZ1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 411-483