ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0K0E7Y6_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A0K0E7Y6_F1_nD4

A0A0K0E7Y6_F1_nD4

UID: 003924810

AlphaFold

Range: 541-645
AlphaFold: AF-A0A0K0E7Y6
UniProt: A0A0K0E7Y6 (all domains)

Protein: SURP motif domain-containing protein (Splicing factor 3A subunit 1)

3D Structure

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Related Domains

Browse other domains in ubiquitin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

AlphaFold DB: A0A0K0E7Y6 UniProt: A0A0K0E7Y6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 541-645