ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0K0EQM1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A0K0EQM1_F1_nD3

A0A0K0EQM1_F1_nD3

UID: 003937880

AlphaFold

Range: 376-565
AlphaFold: AF-A0A0K0EQM1
UniProt: A0A0K0EQM1 (all domains)

Protein: SEFIR domain-containing protein (Small ribosomal subunit protein bS16m)

3D Structure

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Related Domains

Browse other domains in SEFIR →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupToll/Interleukin receptor TIR domain(2007.9)

TT-groupToll/Interleukin receptor TIR domain(2007.9.1)

FFamilySEFIR(2007.9.1.2)

Pfam Families

SEFIR domain

ClanCL0173STIR

External Links

AlphaFold DB: A0A0K0EQM1 UniProt: A0A0K0EQM1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 376-565