ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0H3H178_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A0H3H178_F1_nD3

A0A0H3H178_F1_nD3

UID: 003942598

AlphaFold

Range: 156-385
AlphaFold: AF-A0A0H3H178
UniProt: A0A0H3H178 (all domains)
Gene: KPHS_p200310

Protein: Integrase core subunit

3D Structure

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Related Domains

Browse other domains in TnsB_C →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyTnsB_C(2484.1.1.219)

Pfam Families

TnsB C-terminal domain

ClanCL0219RNase_H

External Links

AlphaFold DB: A0A0H3H178 UniProt: A0A0H3H178

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 156-385