ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A0H3GV55_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A0H3GV55_F1_nD5

A0A0H3GV55_F1_nD5

UID: 003943688

AlphaFold

Range: 381-560
AlphaFold: AF-A0A0H3GV55
UniProt: A0A0H3GV55 (all domains)
Gene: KPHS_32730

Protein: Type VI secretion system tip protein VgrG

3D Structure

Loading viewer...

Related Domains

Browse other domains in Phage_base_V →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupTail-associated lysozyme gp5-N(2.7)

TT-groupTail-associated lysozyme gp5-N(2.7.1)

FFamilyPhage_base_V(2.7.1.1)

Pfam Families

PF04717Phage_base_V

Type VI secretion system/phage-baseplate injector OB domain

ClanCL0021OB

External Links

AlphaFold DB: A0A0H3GV55 UniProt: A0A0H3GV55

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 381-560