ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0H3GR07_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0H3GR07_F1_nD1

A0A0H3GR07_F1_nD1

UID: 003944003

AlphaFold

Range: 1-155
AlphaFold: AF-A0A0H3GR07
UniProt: A0A0H3GR07 (all domains)
Gene: KPHS_05560

Protein: IS3 family element, transposase orfB

3D Structure

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Related Domains

Browse other domains in rve, rve_3 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve, rve_3(2484.1.1.194)

Pfam Families

Integrase core domain

ClanCL0219RNase_H

Integrase core domain

ClanCL0219RNase_H

External Links

AlphaFold DB: A0A0H3GR07 UniProt: A0A0H3GR07

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-155